CDS
| Accession Number | TCMCG005C13475 |
| gbkey | CDS |
| Protein Id | XP_020261399.1 |
| Location | join(58148535..58149050,58168094..58168342,58168440..58168554,58168557..58168572,58168663..58168798,58168888..58168941,58169047..58169190,58169287..58169429,58169531..58169615,58172755..58172934,58173101..58173244,58173329..58173487,58173673..58173740,58174085..58174207,58174288..58174387,58174481..58174590,58174664..58174976,58175046..58175171,58175241..58175360,58175444..58175515,58175605..58175703,58175800..58175922) |
| Gene | LOC109837525 |
| GeneID | 109837525 |
| Organism | Asparagus officinalis |
Protein
| Length | 1065aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA376608; |
| db_source | XM_020405810.1 |
| Definition | LOW QUALITY PROTEIN: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 |
EGGNOG-MAPPER Annotation
| COG_category | KL |
| Description | SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15505
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0009507 [VIEW IN EMBL-EBI] GO:0009526 [VIEW IN EMBL-EBI] GO:0009536 [VIEW IN EMBL-EBI] GO:0009941 [VIEW IN EMBL-EBI] GO:0031967 [VIEW IN EMBL-EBI] GO:0031975 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044434 [VIEW IN EMBL-EBI] GO:0044435 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGCCGCCATCACTTGAGGAATCCGAAGCTCTCAAGCCAAAGTTCTTGCTCGCCGAAGAGATCGCCTCCATCCGATCAGTAATCGGCGGCAAAATCCCCGAATCAAAGATCATCGGAGCCCTCACCGCCGCCGGAAACAACCCTGATCGCGCTGTCGGCATCCTCCTCGACTCGCCGGAGCTAATCGCAGACCCAAAACCCGTTGAAAAGGAGGTAGAGTCCGAACTCCCCATAAAAGCTACTGAGCCTAAGATCGTCGAAAAAGACACTGAAGTCAGTCTTGAAGAGGAGGTTGGTGATAACTCGAGTCTTTTAGAATCAAATATTGTTTCTAACAAGAAAAAACAAGGAACAAAAGTTGAGATGGCTGATTCTAATAGAGTTGCTACTCCAAAGAAGGAGGCTTTAGAAGAGTATGAGAAGGTTTTAGCAAGGAGTCATTGTGCTCCTTATCTTAATCCAAGGCCCATTAGGGCTATTAAGCCGGAGACGGTAACAGATCGAAGAATTCAATTGGTGCCTGAGGTTGATGCAGCTGAGTTTGCCGAGTTTCCTGAAGAGGGCAATTGGGTTTTTATCGGGAGAACTTATGTAGCTGGGTTATCGACTTGTCGAGGGAAGAAGAAGATTGATCCTGGTGAGATTGTTTACTTTACCTTTCCAAAGACTGATTTTCAAAAGCAATATGGGAGAAGGTGGGTGAGGGTGAAAGCTGCAGCTGCATCGTCGGAGATTGTAAGATTTTCTACCAAGAGAGCTGGAGAGATTGGTAAGCTTCCACCAGAATGGTCGACGTGTCTCATTCCGCTTGTGAATTCGTCTAAGGTTAAGGTTAAGGGACGGTGTGTGACTGCGACAACTGAACTTAGATTGATGCAAGTTTTGTTATATGTTAGCTTATACATTCATAGTTCGATTTTTACGGAAGGGGATAAATCTTCATTTAAGCTAGAAGCTTCTGCACCGATAGATCCTAATGTTTGTCCCCTCCCAACTCTCTTCAGACTAATGAAGATGAAACCAGTTCAAAAGGCAGAATTCACTCCTGAGGATCTTGATTCCGGAAAGCGAACTCTAAGTTTAAGAGGTGATGGTGAATCCCAAATTGTGGGTCTTGCAAAACGGCGAAAAACAGGCACTACTTATGCTGAACAGGATGAAGATGAACAAGCGATCTCTGAGGCCTCTTTGAATAAACTTGTCGGCACTGCAGAGTTTTATGACTTAGAGGAGGCAGAACCTCCAAGCACACTCCTCTGTAGTTTGTGGCCATACTAAAAACAAGCCCTCTATTGGATGTCAAAACTAGAGAAGGGGCAGCAAGCAGAAAAGACACTTCATCCTTGTTGGGCAGAGTACAATATTTGTGATACGAGAGCATCAACTATATATGTGAATATTTTCTCTGGAGAAGCTATAGCTGATTTTCCTAGTGCAACTCAGATGGCACGAGGAGGGATTTTAGCAGATGCAATGGGGCTTGGAAAGACTGTCATGAAAATTTCTCTAATACTTGCAAATCCAAGGGGAAGATCATGAAACCATGATATAGAAATGGAGAATCCTGAGGAAGAATCAAATTTTGTAAAGGGAGGAACCCTAATTGTTTGTCCCATGGCATTACTTGGCCAATGGAAGGATGAGCTAGAGACCCATTCACGGCATGGTTCAATTTCTGTATTCATTCACTATGGTTGTGACAGAACAAATGATCCCAGAGAAATTGCCATTTATGATGTCGTATTAACAACATATGGGGTTCTACAATCATCTTTTAAATCTAATTCAAATTCAAAGCCGAGCATATTTCACAGAATTAATTGGTACAGAGTGGTACTAGATGAAGCACACACCATCAAATCTTCAAAAGCTCAAGTAGCCCAATCAGCCTTTGCTCTAACTGCATACTGCCGTTGGTGTCTTACTGGTACTCCTCTTCAGAATAATTTGGAAGATCTCTACAGCCTCCTTTGTTTCTTAAAGGTCCAGCCATGGTGTAATTGGGCATTGTGGCAGAAACTGATTCAAGGGCCTTATGAGAAAGGTGATGAAAAAGGGTTAAGATTGGTTAGAGGTATTCTAAGATCACTGATGCTTAGAAGAACGAAGGACACAAAGGATACAAATGGAAGGCCCATTCTCGTTCTGCCTCCTGCCACTGTACAGATTGTGGAATGTGAACAATCAGAAGCTGAGCGTGTTTTCTATGATGCTCTTTTCAGGAAATCAAAGGTCAAGTTTGATCAATTGGTTGCACAAGGAAAAGTTCTTCACAACTACGCTTCCATACTAGAGTTTCTTAAATTGAGGCAATGCTGCAACCACCCTTTCCTAGTTGTCAGTCAAAAGGGAAATCAAAAGTATGCAGATCTCAACAAACTAGCCCGTCATTTTCTACATGAATCAAACTCAGCCCCCAGCAAAGCATATGTAGAAGAAGTAATTGATGGACTTCGTCGAGGGGATGTAACAGAATGCCCAATTTGCCTTGAATCAGCATCAGATGATCCAGTGCTCACTCCATGTGCACATAGAATGTGCAGAGAGTGCCTTCTTGCTAGTTGGTCGAGTCCAGCTGGTGGGCCATGCCCAATTTTCCGCAAGGCTCTGACTGAAGCTAGCCTTATTACATGCCCGTACGAGAATAATTTTCAGGTTGATGCACATGAGAACTGGAAGGATTCTTCAAAGGTCGCTGAGCTCCTTAAGTGCATAGAGAGCATTAAGAGATCAGGTTCAGGTGAAAAGAGCATTGTGTTTAGCCAATGGACTTCATTCTTGAATTTGCTCGAGATTCCTCTTCGTAAGAAAAATATCGGATACTTAAGGTTTGATGGAAAGCTGAATCAGAAGAATAGGGAAAGGGTCTTGAAGGAGTTCAATGAGACCAGAGATAAGACGGTCTTGTTAATGTCACTGAAGGCTGGAGGTGTAGGATTAAATCTGACTGCTGCTTGCTTCCAATGTCTTTCTGATCCTTGGTGGAATCCTGCAGTAGAAGAGAAAGCGATCATGAGGATTCATCGAATTAGGCAGAAAAGGAAGGTCATAGTGAGGAGGTTCATTGTTAAGGACACAGTGGAGGAGAGGATGCAGCAGGTGCAGGTGAAGCAGCAGCGAATGATTGCAGGTGCTCTCACTGATGATGAAGTCAGGACCGCTCGTCTTGAGGAGCTTAAGATGCTCTTCAGATAA |
| Protein: MPPSLEESEALKPKFLLAEEIASIRSVIGGKIPESKIIGALTAAGNNPDRAVGILLDSPELIADPKPVEKEVESELPIKATEPKIVEKDTEVSLEEEVGDNSSLLESNIVSNKKKQGTKVEMADSNRVATPKKEALEEYEKVLARSHCAPYLNPRPIRAIKPETVTDRRIQLVPEVDAAEFAEFPEEGNWVFIGRTYVAGLSTCRGKKKIDPGEIVYFTFPKTDFQKQYGRRWVRVKAAAASSEIVRFSTKRAGEIGKLPPEWSTCLIPLVNSSKVKVKGRCVTATTELRLMQDXLLYVSLYIHSSIFTEGDKSSFKLEASAPIDPNVCPLPTLFRLMKMKPVQKAEFTPEDLDSGKRTLSLRGDGESQIVGLAKRRKTGTTYAEQDEDEQAISEASLNKLVGTAEFYDLEEAEPPSTLLCSLWPYXKQALYWMSKLEKGQQAEKTLHPCWAEYNICDTRASTIYVNIFSGEAIADFPSATQMARGGILADAMGLGKTVMKISLILANPRGRSXNHDIEMENPEEESNFVKGGTLIVCPMALLGQWKDELETHSRHGSISVFIHYGCDRTNDPREIAIYDVVLTTYGVLQSSFKSNSNSKPSIFHRINWYRVVLDEAHTIKSSKAQVAQSAFALTAYCRWCLTGTPLQNNLEDLYSLLCFLKVQPWCNWALWQKLIQGPYEKGDEKGLRLVRGILRSLMLRRTKDTKDTNGRPILVLPPATVQIVECEQSEAERVFYDALFRKSKVKFDQLVAQGKVLHNYASILEFLKLRQCCNHPFLVVSQKGNQKYADLNKLARHFLHESNSAPSKAYVEEVIDGLRRGDVTECPICLESASDDPVLTPCAHRMCRECLLASWSSPAGGPCPIFRKALTEASLITCPYENNFQVDAHENWKDSSKVAELLKCIESIKRSGSGEKSIVFSQWTSFLNLLEIPLRKKNIGYLRFDGKLNQKNRERVLKEFNETRDKTVLLMSLKAGGVGLNLTAACFQCLSDPWWNPAVEEKAIMRIHRIRQKRKVIVRRFIVKDTVEERMQQVQVKQQRMIAGALTDDEVRTARLEELKMLFR |